Protein Information

Protein ZmbHLH139
ZmbHLH139 is a protein in the bHLH family.
Information
TF Name:	ZmbHLH139
Species:	Maize
TF Family:	bHLH
Gene Name(Synonym):	BHLH139
Uniprot ID:	C0HGX9
Subgenome:	1

Overview of domains present in v5 transcripts
	PF00010
Zm00001eb238140_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d016095	DAPseq	sequence	fimo	position
Zm00001d016095	DAPseq	sequence	fimo	position
Zm00001d016095	ChIPseq	sequence	fimo	position
Zm00001d016095	PChIPseq	sequence	fimo	position

Zm00001eb238140_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MGDGQCELVVDNHCQLRHRLDLSGAEDLFSVIGTWEERTDDGGAGDGGGGGSSAPAMRAYRQISCSAGAVAATRLTGKSR
RRTGEEEEEKGSGGSAPGPAHKKHNKAGSAVTDDDEGAPKISHVAVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIG
GVVDYIKELQQVLRSLEAKKHRKAYAEQVLSPRPSAGGVSTSVSAASPRHLAVKSVAPLSPRMAVPISPRTPTPGSPYKA
AASGVAGCCRLPLLPPYMLSSSAAAAAASYSHDQQQHYSTQTTTYLPTLDSLVTELATQQAACRPAAAAAGLALPDVKVE
FAGPNLVLKTVSHRAPGQALKIIAALESLSLQILHVSVSAVDDTMLHSFTIKIGIECELSAEELVQEIQQTLL

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00010
PF00010
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Nucleotide Sequence
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CTCCGATCCTCTCACTTTTTCCGAG...

GRMZM2G064638_T01 from maize genome v3

Related TFome: pUT3408

Amino Acid Sequence
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MGDGQCELVVDNHCQLRHRLDLSGAEDLFSVIGTWEERTDDGGAGDGGGGGSSAPAMRAYRQISCSAGAVAATRLTGKSR
RRTGEEEEEKGSGGSAPGPAHKKHNKAGSAVTDDDEGAPKISHVAVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIG
GVVDYIKELQQVLRSLEAKKHRKAYAEQVLSPRPSAGGVSTSVSAASPRHLAVKSVAPLSPRMAVPISPRTPTPGSPYKA
AASGVAGCCRLPLLPPYMLSSSAAAAAASYSHDQQQHYSTQTTTYLPTLDSLVTELATQQAACRPAAAAAGLALPDVKVE
FAGPNLVLKTVSHRAPGQALKIIAALESLSLQILHVSVSAVDDTMLHSFTIKIGIECELSAEELVQEIQQTLL

Nucleotide Sequence
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CTCCGATCCTCTCACTTTTTCCGAG...

Zm00001d016095_T001 from maize genome v4

Amino Acid Sequence
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MGDGQCELVVDNHCQLRHRLDLSGAEDLFSVIGTWEERTDDGGAGDGGGGGSSAPAMRAYRQISCSAGAVAATRLTGKSR
RRTGEEEEEKGSGGSAPGPAHKKHNKAGSAVTDDDEGAPKISHVAVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIG
GVVDYIKELQQVLRSLEAKKHRKAYAEQVLSPRPSAGGVSTSVSAASPRHLAVKSVAPLSPRMAVPISPRTPTPGSPYKA
AASGVAGCCRLPLLPPYMLSSSAAAAAASYSHDQQQHYSTQTTTYLPTLDSLVTELATQQAACRPAAAAAGLALPDVKVE
FAGPNLVLKTVSHRAPGQALKIIAALESLSLQILHVSVSAVDDTMLHSFTIKIGIECELSAEELVQEIQQTLL

Nucleotide Sequence
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CTCCGATCCTCTCACTTTTTCCGAG...

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Protein ZmbHLH139

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmbHLH139 is the regulator

Interactions where ZmbHLH139 is the target
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Zm00001eb238140_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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GRMZM2G064638_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d016095_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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